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ontresearch/wf-human-variation-sv:latest

Manifest digest

sha256:4bf87ee063d2e8e6f1460ff0d409f80d73b4be96c395cbcf18c92d6bfce754f3

OS/ARCH

linux/amd64

Compressed size

265.96 MB

Last pushed

6 days by epi2melabs

Type

Image

Manifest digest

sha256:4bf87ee063d2e8e6f1460ff0d409f80d73b4be96c395cbcf18c92d6bfce754f3

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.version=24.040 B
4ADD file ... in / 29.21 MB
5CMD ["/bin/bash"]0 B
6ENV DEBIAN_FRONTEND=noninteractive0 B
7LABEL maintainer=Oxford Nanopore Technologies0 B
8ARG WF_USER=epi2meuser0 B
9ARG WF_UID=10000 B
10ARG WF_GID=1000 B
11ARG ARCH=linux-640 B
12ARG MICROMAMBA_VERSION=1.5.120 B
13SHELL [/bin/bash -o pipefail -c]0 B
14RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1002.37 MB
15ENV SHELL=/bin/bash WF_USER=epi2meuser WF_UID=1000 WF_GID=1000 B
16ENV CW_ROOT=/opt/custflow0 B
17ENV HOME=/opt/custflow/epi2meuser0 B
18ENV CONDA_DIR=/opt/custflow/epi2meuser/conda0 B
19ENV PATH=/opt/custflow/epi2meuser/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
20COPY fix-permissions /usr/local/bin/fix-permissions # buildkit667 B
21RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=100663 B
22COPY entrypoint.sh /usr/local/bin/entrypoint.sh # buildkit358 B
23RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=100358 B
24ENTRYPOINT ["/usr/local/bin/entrypoint.sh"]0 B
25RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1001.29 KB
26RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1005.24 KB
27USER 10000 B
28WORKDIR /opt/custflow/epi2meuser32 B
29RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1005.91 MB
30ENV MAMBA_EXE=/opt/custflow/epi2meuser/bin/micromamba0 B
31ENV MAMBA_ROOT_PREFIX=/opt/custflow/epi2meuser/conda0 B
32USER 10000 B
33WORKDIR /opt/custflow/epi2meuser32 B
34ARG ENVFILE=environment.yaml0 B
35ARG ROOT_INIT_SCRIPT=root_init_script.sh0 B
36ARG BEFORE_SCRIPT=before_script.sh0 B
37ARG POST_INSTALL_SCRIPT=post_install_script.sh0 B
38ARG AFTER_SCRIPT=after_script.sh0 B
39ARG BIN_DIR=bin0 B
40ENV WFSV_TRBED_PATH=/cwg/data/wf_human_sv_trbed0 B
41USER 00 B
42COPY root_init_script.sh /opt/custflow/epi2meuser/ # buildkit438 B
43COPY bin/* /usr/local/bin/ # buildkit750 B
44COPY whalefish_info /usr/share/whalefish/info # buildkit251 B
45RUN |6 ENVFILE=environment.yaml ROOT_INIT_SCRIPT=root_init_script.sh BEFORE_SCRIPT=before_script.sh41.7 MB
46USER 00 B
47COPY before_script.sh /opt/custflow/epi2meuser/ # buildkit242 B
48COPY post_install_script.sh /opt/custflow/epi2meuser/ # buildkit248 B
49COPY after_script.sh /opt/custflow/epi2meuser/ # buildkit1.07 KB
50COPY environment.yaml /opt/custflow/epi2meuser/environment.yaml # buildkit403 B
51RUN |6 ENVFILE=environment.yaml ROOT_INIT_SCRIPT=root_init_script.sh BEFORE_SCRIPT=before_script.sh186.75 MB
52USER 00 B
53WORKDIR /opt/custflow/epi2meuser32 B

Command

 ARG RELEASE